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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
2
total RNA-seq
Assay category
118
DNA binding
2
Transcription
Target of assay
61
histone
61
histone modification
57
transcription factor
control
34
broad histone mark
27
narrow histone mark
15
RNA binding protein
3
chromatin remodeller
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
120
bam
119
bigWig
117
bed narrowPeak
106
fastq
95
bigBed narrowPeak
10
bed bed3+
2
tsv
Organism
120
Homo sapiens
Biosample type
81
tissue
35
in vitro differentiated cells
2
primary cell
2
stem cell
Organ
50
liver
42
pancreas
18
epithelium
9
embryo
5
adipose tissue
5
connective tissue
Project
120
AMP
Genome assembly (visualization)
119
GRCh38
119
hg19
Lab
120
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
organ_slims!
spinal cord
target.investigated_as!
control
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
29
body of pancreas
25
endocrine pancreas
14
right lobe of liver
7
omental fat pad
3
+ See 2 more…
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
primary cell
pancreatic acinar cell
2
stem cell
hESC
2
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