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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
3
single cell RNA-seq
Assay category
47
Transcription
27
DNA methylation
8
3D chromatin structure
DNA accessibility
Target of assay
3
control
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
94
December, 2017
82
July, 2019
80
April, 2019
76
October, 2018
70
November, 2018
59
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2019
31
June, 2019
28
December, 2018
25
February, 2020
23
January, 2019
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
59
bigWig
56
bam
47
tsv
23
bed bedMethyl
23
bigBed bedMethyl
4
bed bed3+
4
hdf5
Organism
82
Homo sapiens
Biosample type
53
tissue
29
primary cell
Organ
20
heart
15
connective tissue
13
epithelium
12
brain
10
vasculature
9
adipose tissue
9
blood vessel
9
kidney
8
musculature of body
7
liver
5
limb
4
pancreas
2
artery
2
pericardium
1
eye
Project
82
AMP
Genome assembly (visualization)
66
hg19
55
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
spleen
assay_slims!
DNA accessibility
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
RRBS
WGBS
Hi-C
single cell RNA-seq
tissue
heart left ventricle
2
1
4
gastrocnemius medialis
4
omental fat pad
4
subcutaneous adipose tissue
4
heart
2
1
+ See 23 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
Purkinje cell
1
+ See 20 more…
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