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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ATAC-seq
Assay category
51
DNA binding
20
DNA accessibility
7
Transcription
5
DNA methylation
1
3D chromatin structure
Date released
10
February, 2023
4
February, 2021
3
October, 2019
2
August, 2021
1
January, 2018
Available data
18
bigWig
17
bed narrowPeak
bam
13
bigBed narrowPeak
12
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
20
Homo sapiens
Biosample type
17
in vitro differentiated cells
3
tissue
Organ
98
pancreas
83
kidney
81
epithelium
35
artery
35
blood vessel
35
heart
35
vasculature
28
eye
21
liver
20
connective tissue
10
lung
9
blood
9
bodily fluid
4
bone element
4
skeleton
3
adipose tissue
2
brain
2
musculature of body
1
pituitary gland
1
skin of body
Project
20
AMP
Genome assembly (visualization)
20
hg19
Lab
18
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
organ_slims!
spleen
files.file_type!
bam
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
in vitro differentiated cells
adipocyte
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
tissue
adipose tissue
3
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