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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ATAC-seq
1
snATAC-seq
Assay category
72
Transcription
68
DNA accessibility
Date released
64
August, 2021
3
February, 2023
1
May, 2022
Available data
490
bed narrowPeak
387
bam
348
bigWig
240
bigBed narrowPeak
208
bed bed3+
207
bed broadPeak
205
bigBed broadPeak
100
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
68
Homo sapiens
Biosample type
65
tissue
3
in vitro differentiated cells
Organ
64
kidney
1
musculature of body
Project
68
AMP
Genome assembly (visualization)
64
GRCh38
4
hg19
Lab
64
Katalin Susztak, Upenn
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
68 results
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ATAC-seq
snATAC-seq
tissue
kidney
64
skeletal muscle tissue
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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