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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
WGBS
21
RRBS
1
DNAme array
Assay category
1803
DNA binding
1355
Transcription
781
DNA accessibility
89
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
27
July, 2019
15
August, 2017
February, 2021
5
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
16
bam
15
bigWig
13
fastq
Organism
89
Homo sapiens
Biosample type
52
primary cell
36
tissue
1
cell line
Organ
47
epithelium
47
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
spleen
1
eye
1
limb
1
pericardium
Project
48
AMP
41
HPAP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
48
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
organ_slims!
spleen
month_released!
February, 2021
BIOSAMPLE
ASSAY
89 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 12 more…
cell line
HepG2
1
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