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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
DNase-seq
1
Hi-C
pCHi-C
Assay category
1
3D chromatin structure
1
DNA accessibility
Date released
2
October, 2019
Available data
582
bam
522
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
114
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
tar
2
bed bed3+
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
2
Homo sapiens
Biosample type
204
tissue
36
primary cell
25
in vitro differentiated cells
3
stem cell
2
cell line
Organ
2
pancreas
Project
2
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
2
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
spleen
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
2 results
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DNase-seq
Hi-C
cell line
Panc1
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