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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
41
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
56
DNA binding
42
Transcription
14
DNA accessibility
Target of assay
48
histone
48
histone modification
25
broad histone mark
23
narrow histone mark
8
control
Date released
406
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
309
October, 2019
286
August, 2017
228
February, 2021
200
June, 2019
199
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
94
December, 2017
90
July, 2019
80
April, 2019
78
November, 2018
73
September, 2018
61
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
28
December, 2018
23
February, 2020
23
January, 2019
21
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
November, 2020
7
August, 2020
7
January, 2018
6
December, 2019
5
March, 2019
5
March, 2023
3
August, 2018
3
June, 2018
1
October, 2022
Available data
112
fastq
111
bam
103
bigWig
62
bed narrowPeak
41
tsv
14
bigBed narrowPeak
1
csv
Organism
112
Homo sapiens
Biosample type
73
primary cell
39
in vitro differentiated cells
Organ
72
pancreas
61
epithelium
13
embryo
Project
112
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
112
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
spleen
connective tissue
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
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