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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
2
RNA microarray
2
single cell RNA-seq
2
snATAC-seq
Assay category
3
3D chromatin structure
2
DNA accessibility
2
Transcription
Date released
February, 2021
4
December, 2019
3
October, 2022
1
August, 2022
1
May, 2022
Available data
4
tsv
3
bedpe bed3+
3
cool
3
hic
1
bed bed3+
1
txt
Organism
9
Homo sapiens
Biosample type
4
tissue
3
primary cell
2
in vitro differentiated cells
Organ
5
epithelium
4
pancreas
2
kidney
1
blood vessel
1
musculature of body
vasculature
1
vein
Project
6
AMP
3
HPAP
Genome assembly (visualization)
4
hg19
Lab
6
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
224
inconsistent ontology term
28
inconsistent control
9
audit script error
organ_slims!
spleen
vasculature
month_released!
February, 2021
BIOSAMPLE
ASSAY
9 results
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Clear Filters
Hi-C
RNA microarray
single cell RNA-seq
snATAC-seq
tissue
islet of Langerhans
1
kidney interstitium
1
renal glomerulus
1
skeletal muscle tissue
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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