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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
244
ChIP-seq
Assay category
244
DNA binding
Target of assay
244
histone
244
histone modification
148
narrow histone mark
96
broad histone mark
68
control
9
transcription factor
Date released
85
May, 2021
57
August, 2017
40
October, 2019
27
May, 2020
16
August, 2021
13
November, 2017
6
October, 2017
Available data
863
bigWig
845
bed narrowPeak
779
bam
bigBed narrowPeak
321
tagAlign
224
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
244
Homo sapiens
Biosample type
129
tissue
87
primary cell
26
in vitro differentiated cells
2
cell line
Organ
49
liver
48
brain
19
connective tissue
13
musculature of body
9
pancreas
7
adipose tissue
4
epithelium
1
pituitary gland
Project
160
AMP
84
T1D
Genome assembly (visualization)
190
hg19
160
GRCh38
Lab
160
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
spleen
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
244 results
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Clear Filters
ChIP-seq
tissue
liver
44
skeletal muscle tissue
13
islet of Langerhans
8
subcutaneous abdominal adipose tissue
7
brain
6
+ See 41 more…
primary cell
monocyte
84
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
13
adipocyte
12
pancreatic PP cell
1
cell line
HepG2
2
See all biosamples
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