Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
48
snATAC-seq
46
ATAC-seq
45
single cell RNA-seq
41
WGBS
3
Hi-C
Assay category
121
Transcription
94
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
September, 2020
39
February, 2021
7
August, 2020
3
October, 2022
Available data
134
zippedFastqFolder
128
fastq
7
bigWig
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
259
Homo sapiens
Biosample type
259
primary cell
Organ
127
epithelium
127
pancreas
Project
2772
AMP
259
HPAP
146
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
7
GRCh38
3
hg19
Lab
259
Klaus Kaestner, Upenn
Audit category:
30
audit script error
organ_slims!
spleen
files.file_type!
tsv
month_released!
September, 2020
BIOSAMPLE
ASSAY
259 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
snATAC-seq
ATAC-seq
single cell RNA-seq
WGBS
Hi-C
primary cell
Langerhans cell
48
45
pancreatic alpha cell
27
27
25
1
pancreatic beta cell
10
15
16
1
exocrine cell
39
pancreatic acinar cell
4
1
Download