Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
7
ATAC-seq
1
Hi-C
Assay category
56
Transcription
7
DNA accessibility
1
3D chromatin structure
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
80
April, 2019
79
November, 2018
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
40
May, 2024
28
December, 2018
24
February, 2018
22
October, 2017
19
April, 2020
19
March, 2020
18
January, 2019
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
42
fastq
19
zippedFastqFolder
3
bigWig
1
bam
1
bed broadPeak
1
bedpe
1
hic
Organism
64
Homo sapiens
Biosample type
59
primary cell
5
tissue
Organ
24
pancreas
19
epithelium
Project
59
HPAP
5
AMP
Genome assembly (visualization)
5
GRCh38
3
hg19
Lab
59
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
organ_slims!
spleen
files.file_type!
tsv
BIOSAMPLE
ASSAY
64 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
islet of Langerhans
4
1
Download