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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
13
WGBS
Assay category
28
DNA methylation
Date released
23
July, 2019
August, 2017
5
November, 2018
Available data
3086
bam
2841
bigWig
1621
bed narrowPeak
1510
tsv
1047
fastq
987
bigBed narrowPeak
313
tagAlign
280
bed broadPeak
269
bigBed broadPeak
239
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
18
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
2
brain
2
liver
2
musculature of body
spleen
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
spleen
month_released!
August, 2017
BIOSAMPLE
ASSAY
28 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
aorta
1
+ See 7 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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