Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
1
ChIP-seq
Assay category
5
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
4
July, 2019
2
October, 2019
Available data
3368
bam
3113
bigWig
1763
bed narrowPeak
1599
tsv
1334
fastq
1029
bigBed narrowPeak
398
tagAlign
321
bed broadPeak
284
bigBed broadPeak
272
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
4
primary cell
1
cell line
1
tissue
Organ
4
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
6
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
spleen
BIOSAMPLE
ASSAY
6 results
search-icon
table-tab-icon
Clear Filters
Hi-C
ChIP-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
tissue
medial globus pallidus
1
Download