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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
8
DNase-seq
1
FAIRE-seq
Assay category
60
DNA binding
9
DNA accessibility
Target of assay
60
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
Date released
312
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
69
November, 2018
64
April, 2019
50
December, 2017
October, 2018
42
August, 2017
27
December, 2018
15
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
79
fastq
78
bam
74
bigWig
69
bed narrowPeak
69
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
csv
Organism
69
Homo sapiens
Biosample type
56
cell line
13
tissue
Organ
51
liver
12
blood
12
bodily fluid
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
69
AMP
Genome assembly (visualization)
68
GRCh38
67
hg19
Lab
69
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
spleen
month_released!
October, 2018
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
44
GM12878
12
tissue
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
pancreas
1
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