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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
46
ATAC-seq
41
WGBS
33
single cell RNA-seq
21
snATAC-seq
3
Hi-C
Assay category
109
Transcription
67
DNA accessibility
41
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
September, 2020
February, 2021
7
August, 2020
3
October, 2022
Available data
134
zippedFastqFolder
83
fastq
7
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
220
Homo sapiens
Biosample type
220
primary cell
Organ
127
epithelium
127
pancreas
Project
3597
AMP
244
T1D
220
HPAP
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
7
GRCh38
3
hg19
Lab
220
Klaus Kaestner, Upenn
Audit category:
3
audit script error
organ_slims!
spleen
month_released!
September, 2020
February, 2021
BIOSAMPLE
ASSAY
220 results
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total RNA-seq
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell
27
27
25
1
Langerhans cell
33
21
pancreatic beta cell
10
15
16
1
exocrine cell
39
pancreatic acinar cell
4
1
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