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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
424
ChIP-seq
5
total RNA-seq
Assay category
424
DNA binding
5
Transcription
Target of assay
258
transcription factor
89
histone
89
histone modification
74
control
66
recombinant protein
50
broad histone mark
43
RNA binding protein
39
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
28
December, 2018
25
February, 2020
23
January, 2019
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
415
bam
354
bigWig
347
fastq
328
bed narrowPeak
327
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
5
tsv
3
tar
Organism
429
Homo sapiens
Biosample type
338
cell line
82
tissue
9
primary cell
Organ
320
liver
91
brain
18
blood
18
bodily fluid
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
429
AMP
Genome assembly (visualization)
301
hg19
300
GRCh38
Lab
429
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
spleen
month_released!
February, 2023
BIOSAMPLE
ASSAY
429 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
5
GM12878
18
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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