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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
3
Hi-C
1
MPRA
Assay category
18
DNA binding
Transcription
3
3D chromatin structure
Target of assay
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
80
April, 2019
78
November, 2018
74
October, 2018
48
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
28
December, 2018
24
February, 2018
22
October, 2017
18
January, 2019
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
18
bam
18
fastq
15
bed narrowPeak
15
bigBed narrowPeak
15
bigWig
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
21
Homo sapiens
Biosample type
19
cell line
3
primary cell
Organ
18
blood
18
bodily fluid
spleen
3
epithelium
3
pancreas
Project
19
AMP
3
HPAP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
19
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
organ_slims!
spleen
assay_slims!
Transcription
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
Hi-C
MPRA
cell line
GM12878
18
MIN6
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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