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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
5
total RNA-seq
4
ATAC-seq
1
Hi-C
1
pCHi-C
Assay category
5
DNA binding
5
Transcription
4
DNA accessibility
1
3D chromatin structure
Target of assay
4
histone
4
histone modification
4
narrow histone mark
1
control
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
11
bigWig
8
bam
6
tsv
4
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
hic
Organism
16
Homo sapiens
Biosample type
11
tissue
5
cell line
Organ
54
blood vessel
54
vasculature
30
brain
28
heart
16
pancreas
12
musculature of body
11
epithelium
7
kidney
7
limb
5
artery
3
liver
2
connective tissue
2
intestine
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
9
AMP
7
T1D
Genome assembly (visualization)
12
hg19
7
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
2
2
2
pancreas
1
1
1
body of pancreas
2
cell line
EndoC_BH1
1
2
2
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