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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
9
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
6
February, 2023
3
November, 2017
2
February, 2021
1
October, 2019
Available data
3302
bam
3095
bigWig
1795
bed narrowPeak
1541
tsv
1334
fastq
1029
bigBed narrowPeak
398
tagAlign
321
bed broadPeak
284
bigBed broadPeak
272
bed bed3+
153
zippedFastqFolder
73
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
12
Homo sapiens
Biosample type
5
in vitro differentiated cells
4
cell line
2
primary cell
1
tissue
Organ
6
connective tissue
bone element
4
liver
4
skeleton
1
blood vessel
1
brain
1
epithelium
1
vasculature
1
vein
Project
12
AMP
Genome assembly (visualization)
12
hg19
2
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
spleen
bone element
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ATAC-seq
ChIP-seq
FAIRE-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
3
primary cell
endothelial cell of umbilical vein
1
osteoblast
1
tissue
brain
1
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