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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
7
DNase-seq
Assay category
59
DNA binding
7
DNA accessibility
Target of assay
55
histone
55
histone modification
36
broad histone mark
19
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
20
October, 2019
5
June, 2019
2
November, 2017
Available data
160
bam
135
bigWig
116
bed narrowPeak
68
tsv
66
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
tagAlign
3
fastq
2
hdf5
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
66
Homo sapiens
Biosample type
62
tissue
4
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
spleen
vein
10
adipose tissue
6
eye
Project
66
AMP
Genome assembly (visualization)
66
GRCh38
65
hg19
Lab
66
AMP-T2D consortium
organ_slims!
spleen
vein
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
DNase-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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