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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
3
October, 2022
2
November, 2019
1
March, 2019
March, 2020
Available data
683
bam
613
bigWig
471
fastq
411
tsv
211
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bigBed broadPeak
6
bed bedMethyl
6
bedpe bed3+
6
bigBed bedMethyl
6
hic
6
txt
3
cool
1
bedpe
1
hdf5
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
tissue
1
cell line
Organ
6
pancreas
5
epithelium
1
blood vessel
1
heart
1
kidney
1
liver
1
vasculature
1
vein
Project
3
AMP
3
HPAP
Genome assembly (visualization)
6
hg19
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
organ_slims!
spleen
month_released!
March, 2020
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
2
cell line
EndoC_BH1
1
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