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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
8
DNase-seq
5
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
57
DNA binding
9
DNA accessibility
5
DNA methylation
1
Transcription
Target of assay
61
transcription factor
21
RNA binding protein
16
recombinant protein
chromatin remodeller
3
control
Date released
715
February, 2021
408
August, 2017
399
May, 2021
391
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
72
November, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
26
December, 2018
25
February, 2020
22
October, 2017
19
April, 2020
17
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
72
fastq
71
bam
67
bigWig
62
bed narrowPeak
62
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
csv
Organism
72
Homo sapiens
Biosample type
54
cell line
17
tissue
1
primary cell
Organ
48
liver
13
blood
13
bodily fluid
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
72
AMP
Genome assembly (visualization)
66
GRCh38
60
hg19
Lab
72
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
spleen
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
72 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
13
tissue
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
omental fat pad
1
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primary cell
pancreatic cell
1
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