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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
Hi-C
Assay category
1610
DNA binding
1260
Transcription
577
DNA accessibility
44
DNA methylation
23
3D chromatin structure
Date released
9
March, 2020
8
July, 2019
4
October, 2019
August, 2021
1
December, 2018
1
March, 2023
Available data
14
hic
12
bedpe bed3+
4
bed bed3+
4
bigWig
4
hdf5
1
fastq
Organism
23
Homo sapiens
Biosample type
11
tissue
7
primary cell
4
in vitro differentiated cells
1
cell line
Organ
8
epithelium
pancreas
6
musculature of body
5
blood vessel
5
vasculature
4
limb
3
brain
3
heart
3
liver
2
vein
1
connective tissue
Project
22
AMP
1
ITG
Genome assembly (visualization)
17
hg19
1
GRCh38
Lab
22
AMP-T2D consortium
1
ITG
Audit category:
4
inconsistent ontology term
1
audit script error
organ_slims!
stomach
pancreas
month_released!
August, 2021
BIOSAMPLE
ASSAY
23 results
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Hi-C
tissue
gastrocnemius medialis
4
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 2 more…
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
1
See all biosamples
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