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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1419
total RNA-seq
857
ChIP-seq
241
single cell RNA-seq
75
ATAC-seq
31
pCHi-C
27
snATAC-seq
18
small RNA-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
3
snDrop-seq
2
FAIRE-seq
2
RNA microarray
1
Hi-C
Assay category
12
DNA accessibility
Date released
9
November, 2018
3
August, 2017
Available data
209
bam
209
bed narrowPeak
209
bigBed narrowPeak
209
bigWig
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
12
fastq
0
tsv
Organism
12
Homo sapiens
Biosample type
10
tissue
1
in vitro differentiated cells
1
primary cell
Organ
3
liver
3
pancreas
2
brain
2
connective tissue
1
adipose tissue
1
spleen
Project
12
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
12
AMP-T2D consortium
organ_slims!
stomach
BIOSAMPLE
ASSAY
12 results
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DNase-seq
tissue
body of pancreas
2
brain
2
liver
2
islet of Langerhans
1
omental fat pad
1
+ See 2 more…
in vitro differentiated cells
adipocyte
1
primary cell
skeletal muscle myoblast
1
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