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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
8
ATAC-seq
Assay category
14
DNA binding
8
DNA accessibility
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
8
December, 2017
8
February, 2021
6
February, 2018
Available data
102
bam
88
txt
87
bigWig
72
tsv
27
fastq
22
bed narrowPeak
4
bed bed3
3
bed bed3+
Organism
22
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
tissue
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
22
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
inconsistent control read length
organ_slims!
stomach
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
12
Hepatic endoderm
2
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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