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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
48
ChIP-seq
36
DNase-seq
14
ATAC-seq
Assay category
62
Transcription
50
DNA accessibility
48
DNA binding
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
66
February, 2021
52
October, 2019
32
June, 2019
6
May, 2019
4
February, 2023
Available data
156
bam
148
bigWig
94
bed narrowPeak
84
bigBed narrowPeak
62
tsv
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
bed bed3
Organism
160
Homo sapiens
Biosample type
160
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
160
AMP
Genome assembly (visualization)
160
hg19
156
GRCh38
Lab
160
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
stomach
BIOSAMPLE
ASSAY
160 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
tissue
bone tissue
58
tibial nerve
4
24
2
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
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