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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
66
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
57
transcription factor
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
30
December, 2018
21
January, 2019
18
November, 2018
1
October, 2017
Available data
70
bam
70
bigWig
70
fastq
68
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
70
Homo sapiens
Biosample type
54
cell line
16
tissue
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
70
GRCh38
69
hg19
Lab
70
AMP-T2D consortium
Audit category:
1
inconsistent control
organ_slims!
thymus
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
cell line
GM12878
54
tissue
spleen
12
2
1
1
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