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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
45
ATAC-seq
25
ChIP-seq
4
DNase-seq
Assay category
52
Transcription
49
DNA accessibility
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
21
October, 2019
3
May, 2019
2
June, 2019
1
July, 2019
Available data
91
bam
83
bigWig
74
bed narrowPeak
52
tsv
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
126
Homo sapiens
Biosample type
64
cell line
62
tissue
primary cell
Organ
534
connective tissue
520
liver
443
pancreas
422
adipose tissue
216
heart
203
brain
177
kidney
169
blood vessel
169
vasculature
126
artery
96
limb
69
epithelium
66
bone element
54
blood
54
bodily fluid
42
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
126
AMP
Genome assembly (visualization)
126
GRCh38
91
hg19
Lab
126
AMP-T2D consortium
organ_slims!
thymus
biosample_type!
primary cell
BIOSAMPLE
ASSAY
126 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
36
3
2
tibial artery
1
18
2
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