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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
44
ChIP-seq
21
ATAC-seq
Assay category
127
Transcription
44
DNA binding
21
DNA accessibility
Target of assay
22
histone
22
histone modification
16
transcription factor
12
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
192
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
62
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
132
bigWig
128
bam
121
tsv
6
bed narrowPeak
6
tagAlign
Organism
192
Homo sapiens
Biosample type
primary cell
132
in vitro differentiated cells
39
tissue
21
cell line
Organ
61
pancreas
26
epithelium
3
heart
2
embryo
1
connective tissue
thymus
Project
191
AMP
1
T1D
Genome assembly (visualization)
132
hg19
127
GRCh38
Lab
144
AMP-T2D consortium
48
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
organ_slims!
thymus
biosample_type!
primary cell
BIOSAMPLE
ASSAY
192 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
+ See 10 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
cell line
EndoC_BH1
4
1
16
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