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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
90
histone
90
histone modification
48
narrow histone mark
42
broad histone mark
9
transcription factor
8
RNA binding protein
2
control
1
chromatin remodeller
Date released
21
September, 2018
18
October, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
93
bam
90
bigWig
88
bed narrowPeak
51
fastq
29
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
90
Homo sapiens
Biosample type
63
primary cell
15
in vitro differentiated cells
12
cell line
Organ
166
brain
142
pancreas
97
heart
90
epithelium
82
liver
68
vasculature
67
blood vessel
48
limb
35
connective tissue
30
kidney
27
musculature of body
24
nerve
20
artery
12
vein
11
embryo
6
spleen
2
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
88
AMP
2
T1D
Genome assembly (visualization)
90
hg19
88
GRCh38
Lab
90
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
thymus
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
endothelial cell of umbilical vein
12
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
See all biosamples
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