Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1824
ChIP-seq
982
total RNA-seq
508
ATAC-seq
344
single cell RNA-seq
179
DNase-seq
68
WGBS
56
snATAC-seq
52
pCHi-C
28
Hi-C
16
RRBS
16
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
16
Transcription
Date released
16
July, 2019
Available data
16
bam
16
bigWig
16
tsv
Organism
16
Homo sapiens
Biosample type
15
tissue
1
primary cell
Organ
4
brain
3
adipose tissue
3
connective tissue
3
liver
musculature of body
2
pancreas
1
heart
1
kidney
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
organ_slims!
thymus
musculature of body
month_released!
February, 2021
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 8 more…
primary cell
mesenchymal stem cell of adipose
1
See all biosamples
Download