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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
single cell RNA-seq
25
ChIP-seq
7
total RNA-seq
Assay category
53
Transcription
25
DNA binding
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
324
November, 2017
215
August, 2017
94
December, 2017
87
November, 2018
76
February, 2023
73
September, 2018
48
July, 2018
45
February, 2021
43
April, 2018
41
September, 2020
39
February, 2018
37
October, 2018
35
December, 2018
30
January, 2019
24
May, 2022
16
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
3
August, 2018
3
June, 2018
1
March, 2019
Available data
192
bam
188
bigWig
167
tsv
78
fastq
21
bed narrowPeak
21
bigBed narrowPeak
Organism
78
Homo sapiens
Biosample type
46
primary cell
23
cell line
9
tissue
Organ
39
pancreas
33
epithelium
18
blood
18
bodily fluid
7
spleen
5
liver
connective tissue
Project
78
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
78
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
organ_slims!
thymus
connective tissue
BIOSAMPLE
ASSAY
78 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 9 more…
cell line
GM12878
18
HepG2
5
tissue
spleen
7
islet of Langerhans
2
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