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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
histone
305
histone modification
165
narrow histone mark
140
broad histone mark
60
control
9
transcription factor
Date released
23
May, 2020
11
August, 2017
11
November, 2017
9
October, 2019
August, 2021
8
February, 2021
5
May, 2021
2
October, 2017
Available data
2575
bam
2273
bigWig
1476
tsv
1129
fastq
880
bed narrowPeak
651
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
246
bed bed3+
153
zippedFastqFolder
104
txt
69
tagAlign
36
bed bedMethyl
36
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
Organism
68
Homo sapiens
Biosample type
52
tissue
9
cell line
7
in vitro differentiated cells
1
primary cell
Organ
27
liver
19
brain
6
artery
6
blood vessel
6
heart
6
vasculature
4
pancreas
3
connective tissue
2
epithelium
2
musculature of body
1
adipose tissue
Project
69
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
thymus
target.investigated_as!
histone
month_released!
August, 2021
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
tissue
liver
26
brain
2
caudate nucleus
2
cingulate gyrus
2
layer of hippocampus
2
+ See 15 more…
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
in vitro differentiated cells
cardiomyocytes
3
adipocyte
2
pancreatic PP cell
2
primary cell
skeletal muscle myoblast
1
See all biosamples
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