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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
867
ChIP-seq
260
ATAC-seq
174
single cell RNA-seq
160
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
160
DNA accessibility
Date released
145
June, 2019
9
November, 2018
4
October, 2019
2
August, 2017
Available data
159
bam
159
bed narrowPeak
159
bigBed narrowPeak
159
bigWig
158
bed bed3+
158
bed broadPeak
158
bigBed broadPeak
10
fastq
Organism
160
Homo sapiens
Biosample type
160
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
ureter
7
pancreas
5
blood vessel
5
vasculature
4
artery
4
liver
3
eye
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
160
AMP
Genome assembly (visualization)
159
GRCh38
143
hg19
Lab
160
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
ureter
BIOSAMPLE
ASSAY
160 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
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