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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1871
ChIP-seq
1533
total RNA-seq
531
ATAC-seq
356
single cell RNA-seq
194
DNase-seq
85
RNA microarray
75
WGBS
57
pCHi-C
55
snATAC-seq
30
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
August, 2021
Organism
5
Homo sapiens
Biosample type
5
cell line
Organ
2
kidney
2
liver
Project
5
AMP
Lab
5
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
ureter
audit.ERROR.category!
audit script error
audit.ERROR.category!!
audit script error
BIOSAMPLE
ASSAY
5 results
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STARR-seq
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1