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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
6
ChIP-seq
2
Hi-C
Assay category
9
DNA accessibility
6
DNA binding
2
3D chromatin structure
Target of assay
4
transcription factor
2
control
Date released
6
February, 2021
5
June, 2019
4
October, 2019
2
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
17
Homo sapiens
Biosample type
6
cell line
6
primary cell
5
tissue
Organ
153
brain
96
liver
78
kidney
49
connective tissue
49
musculature of body
48
pancreas
36
heart
36
limb
25
epithelium
19
vasculature
ureter
17
blood vessel
14
adipose tissue
10
artery
4
eye
3
embryo
2
nerve
2
vein
1
pituitary gland
1
spleen
Project
17
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
17
AMP-T2D consortium
organ_slims!
ureter
month_released!
January, 2021
BIOSAMPLE
ASSAY
17 results
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DNase-seq
ChIP-seq
Hi-C
cell line
smooth muscle cell of the coronary artery
6
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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