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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
10
ChIP-seq
2
total RNA-seq
1
Hi-C
Assay category
30
DNA accessibility
10
DNA binding
2
Transcription
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
4
narrow histone mark
3
broad histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
42
bam
40
bigWig
38
bed narrowPeak
33
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
2
tsv
1
bedpe bed3+
1
hic
Organism
43
Homo sapiens
Biosample type
35
tissue
8
primary cell
Organ
116
brain
111
kidney
101
limb
55
epithelium
54
vasculature
52
blood vessel
43
heart
43
musculature of body
42
nerve
28
artery
28
eye
22
connective tissue
22
pancreas
21
vein
ureter
9
liver
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
43
AMP
Genome assembly (visualization)
40
GRCh38
38
hg19
Lab
43
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
ureter
BIOSAMPLE
ASSAY
43 results
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DNase-seq
ChIP-seq
total RNA-seq
Hi-C
tissue
heart
18
5
2
1
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
heart right ventricle
1
+ See 1 more…
primary cell
cardiac fibroblast
3
5
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