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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
41
total RNA-seq
1
single cell RNA-seq
Assay category
56
DNA binding
42
Transcription
Target of assay
48
histone
48
histone modification
25
broad histone mark
23
narrow histone mark
8
control
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
112
fastq
111
bam
103
bigWig
62
bed narrowPeak
41
tsv
bigBed narrowPeak
1
csv
Organism
98
Homo sapiens
Biosample type
59
primary cell
39
in vitro differentiated cells
Organ
58
pancreas
47
epithelium
13
embryo
Project
98
AMP
Genome assembly (visualization)
89
GRCh38
89
hg19
Lab
98
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
ureter
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
pancreatic endocrine cell
11
pancreatic acinar cell
8
2
pancreatic alpha cell
10
pancreatic beta cell
10
+ See 1 more…
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
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