Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
Assay category
35
DNA binding
Target of assay
1010
histone modification
1009
histone
511
narrow histone mark
500
transcription factor
497
broad histone mark
339
control
108
RNA binding protein
89
recombinant protein
30
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
17
November, 2017
10
November, 2018
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
35
bam
35
bed narrowPeak
35
bigWig
35
fastq
33
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
Organism
35
Homo sapiens
Biosample type
26
cell line
5
tissue
3
in vitro differentiated cells
1
primary cell
Organ
25
liver
4
blood
4
bodily fluid
3
spleen
2
connective tissue
1
epithelium
Project
35
AMP
Genome assembly (visualization)
35
hg19
33
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
13
inconsistent control read length
8
inconsistent control run_type
organ_slims!
ureter
month_released!
January, 2019
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
22
GM12878
4
tissue
spleen
3
liver
2
in vitro differentiated cells
adipocyte
2
hepatocyte
1
primary cell
skeletal muscle myoblast
1
Download