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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
47
WGBS
3
Hi-C
Assay category
177
Transcription
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
76
February, 2023
74
May, 2022
56
September, 2020
18
February, 2021
3
October, 2022
Available data
132
fastq
93
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
227
Homo sapiens
Biosample type
227
primary cell
Organ
103
epithelium
103
pancreas
Project
3418
AMP
227
HPAP
215
T1D
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
227
Klaus Kaestner, Upenn
Audit category:
3
audit script error
organ_slims!
vasculature
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
227 results
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total RNA-seq
single cell RNA-seq
WGBS
Hi-C
primary cell
Langerhans cell
85
pancreatic alpha cell
42
31
1
exocrine cell
39
pancreatic beta cell
11
16
1
pancreatic acinar cell
1
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