Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
34
DNase-seq
7
ATAC-seq
4
Hi-C
1
WGBS
Assay category
43
DNA binding
41
DNA accessibility
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
31
histone
31
histone modification
20
broad histone mark
12
control
11
narrow histone mark
Date released
39
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
84
bam
71
bed narrowPeak
66
bigWig
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
89
Homo sapiens
Biosample type
89
tissue
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
203
connective tissue
187
heart
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
89
AMP
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
89
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
assay_slims!
Transcription
BIOSAMPLE
ASSAY
89 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
1
muscle of leg
7
13
1
muscle of arm
17
gastrocnemius medialis
4
distal epiphysis of femur
1
+ See 8 more…
See all biosamples
Download