Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
WGBS
20
RRBS
1
DNAme array
Assay category
1845
Transcription
1686
DNA binding
733
DNA accessibility
93
DNA methylation
25
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
23
July, 2019
15
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
33
bed bedMethyl
33
bigBed bedMethyl
21
fastq
15
bam
15
bigWig
6
tsv
Organism
93
Homo sapiens
Biosample type
57
primary cell
35
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
limb
1
pericardium
Project
47
HPAP
46
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
47
Klaus Kaestner, Upenn
46
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
limb
BIOSAMPLE
ASSAY
93 results
search-icon
table-tab-icon
Clear Filters
WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 11 more…
cell line
HepG2
1
See all biosamples
Download