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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
93
single cell RNA-seq
28
DNase-seq
17
total RNA-seq
8
WGBS
3
ATAC-seq
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
123
DNA binding
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
16
control
12
transcription factor
10
RNA binding protein
Date released
57
April, 2019
40
May, 2024
16
May, 2019
5
June, 2019
5
October, 2019
Available data
107
bed narrowPeak
107
bigWig
82
bam
61
bigBed narrowPeak
Organism
123
Homo sapiens
Biosample type
118
tissue
5
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
123
AMP
Genome assembly (visualization)
106
GRCh38
67
hg19
Lab
83
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
organ_slims!
vasculature
assay_title!
GRO-seq
BIOSAMPLE
ASSAY
123 results
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ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
35
heart
14
heart right ventricle
13
right atrium auricular region
10
+ See 1 more…
primary cell
cardiac fibroblast
5
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