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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
14
ATAC-seq
2
ChIP-seq
2
pCHi-C
1
single cell RNA-seq
Assay category
14
DNA accessibility
2
DNA binding
1
Transcription
Target of assay
1
control
1
transcription factor
Date released
400
November, 2017
322
August, 2017
251
October, 2019
211
June, 2019
196
August, 2021
152
May, 2020
124
May, 2021
103
February, 2021
94
December, 2017
80
April, 2019
74
October, 2018
73
November, 2018
70
May, 2019
66
May, 2022
55
February, 2023
47
September, 2018
41
November, 2019
40
May, 2024
36
July, 2019
24
February, 2018
23
October, 2017
15
May, 2023
12
March, 2020
12
November, 2020
11
September, 2017
8
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
July, 2018
1
August, 2018
1
August, 2022
1
December, 2019
1
October, 2022
Available data
506
bam
tsv
495
bigWig
89
txt
11
bed narrowPeak
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
2
tagAlign
Organism
103
Homo sapiens
Biosample type
93
tissue
4
cell line
4
in vitro differentiated cells
2
primary cell
Organ
92
bone element
14
artery
14
blood vessel
14
heart
vasculature
8
skeleton
6
connective tissue
6
limb
3
liver
Project
103
AMP
39
HPAP
Genome assembly (visualization)
17
hg19
11
GRCh38
Lab
103
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
1
inconsistent replicate
organ_slims!
vasculature
bodily fluid
files.file_type!
tsv
BIOSAMPLE
ASSAY
103 results
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RNA microarray
ATAC-seq
ChIP-seq
pCHi-C
single cell RNA-seq
tissue
bone element
84
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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cell line
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
1
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