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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
53
Transcription
2
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
645
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
168
July, 2018
167
February, 2023
96
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
55
bam
54
bigWig
53
tsv
44
fastq
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
65
Homo sapiens
Biosample type
49
primary cell
10
tissue
6
cell line
Organ
49
pancreas
39
epithelium
8
connective tissue
Project
65
AMP
Genome assembly (visualization)
55
GRCh38
55
hg19
Lab
55
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
organ_slims!
vasculature
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
65 results
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single cell RNA-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
primary cell
pancreatic delta cell
7
osteoblast
4
1
1
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
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tissue
islet of Langerhans
6
4
cell line
EndoC_BH1
6
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