Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
7
ATAC-seq
6
total RNA-seq
4
Hi-C
1
WGBS
Assay category
13
DNA binding
7
DNA accessibility
6
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
12
control
1
histone
1
histone modification
1
narrow histone mark
Date released
17
October, 2019
6
February, 2021
5
July, 2019
2
February, 2020
1
May, 2019
Available data
88
bam
71
bed narrowPeak
70
bigWig
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
31
Homo sapiens
Biosample type
31
tissue
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
259
heart
250
kidney
159
bone element
159
brain
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
31
AMP
Genome assembly (visualization)
12
GRCh38
11
hg19
Lab
31
AMP-T2D consortium
organ_slims!
vasculature
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
31 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
1
5
gastrocnemius medialis
1
4
muscle of leg
1
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 5 more…
See all biosamples
Download