Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
184
DNase-seq
26
ChIP-seq
Assay category
184
DNA accessibility
26
DNA binding
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
Date released
180
June, 2019
20
August, 2017
6
November, 2017
3
October, 2019
1
November, 2020
Available data
3207
bam
3014
bigWig
1684
bed narrowPeak
1532
tsv
fastq
959
bigBed narrowPeak
392
tagAlign
305
bed broadPeak
268
bigBed broadPeak
260
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
210
Homo sapiens
Biosample type
188
tissue
21
primary cell
1
cell line
Organ
78
kidney
46
musculature of body
36
brain
36
limb
30
heart
18
epithelium
18
ureter
vasculature
11
blood vessel
11
pancreas
8
connective tissue
4
artery
4
eye
4
vein
2
adipose tissue
2
liver
2
nerve
Project
210
AMP
Genome assembly (visualization)
189
GRCh38
188
hg19
Lab
210
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
vasculature
files.file_type!
fastq
assay_title!
CRISPRi RNA-seq
BIOSAMPLE
ASSAY
210 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 39 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 12 more…
cell line
Panc1
1
See all biosamples
Download