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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
RRBS
7
WGBS
Assay category
21
DNA methylation
Date released
21
July, 2019
Available data
3192
bam
3000
bigWig
1672
bed narrowPeak
1532
tsv
fastq
953
bigBed narrowPeak
378
tagAlign
301
bed broadPeak
268
bigBed broadPeak
260
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
21
Homo sapiens
Biosample type
13
tissue
8
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
2
musculature of body
2
pancreas
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
21
AMP
Genome assembly (visualization)
14
hg19
7
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
files.file_type!
fastq
month_released!
October, 2017
BIOSAMPLE
ASSAY
21 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
brain
1
heart
1
islet of Langerhans
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 3 more…
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