Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
WGBS
20
RRBS
1
DNAme array
Assay category
1729
DNA binding
760
DNA accessibility
374
Transcription
88
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
24
July, 2019
15
August, 2017
7
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
21
fastq
16
bam
16
bigWig
tsv
Organism
88
Homo sapiens
Biosample type
51
primary cell
36
tissue
1
cell line
Organ
47
epithelium
47
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
AMP
41
HPAP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
47
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
files.file_type!
tsv
BIOSAMPLE
ASSAY
88 results
search-icon
table-tab-icon
Clear Filters
WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 12 more…
cell line
HepG2
1
See all biosamples
Download