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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
WGBS
20
RRBS
1
DNAme array
Assay category
1749
DNA binding
758
DNA accessibility
374
Transcription
86
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
24
July, 2019
15
August, 2017
5
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
32
bed bedMethyl
32
bigBed bedMethyl
19
fastq
14
bam
14
bigWig
tsv
Organism
86
Homo sapiens
Biosample type
51
primary cell
34
tissue
1
cell line
Organ
47
epithelium
47
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
vasculature
2
blood vessel
2
brain
spleen
1
eye
1
limb
1
pericardium
Project
45
AMP
41
HPAP
Genome assembly (visualization)
18
hg19
14
GRCh38
Lab
45
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
spleen
files.file_type!
tsv
BIOSAMPLE
ASSAY
86 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 11 more…
cell line
HepG2
1
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